Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 AA414768-201ENSMUST00000121924 1257 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm23547-201ENSMUST00000158210 271 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm23634-201ENSMUST00000175071 91 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm8825-201ENSMUST00000182565 998 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm4518-201ENSMUST00000182638 718 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.39□□□□□ -0.43
Nkx2-1P50220 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nkx2-1P50220 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.38□□□□□ -0.43
Nkx2-1P50220 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.38□□□□□ -0.43
Nkx2-1P50220 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.38□□□□□ -0.43
Nkx2-1P50220 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nkx2-1P50220 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.37□□□□□ -0.43
Nkx2-1P50220 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-1P50220 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms