Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Mir8117-201ENSMUST00000184773 107 ntBASIC13.66□□□□□ -0.22
Nkx2-2P42586 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.66□□□□□ -0.22
Nkx2-2P42586 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.66□□□□□ -0.22
Nkx2-2P42586 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Nkx2-2P42586 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nkx2-2P42586 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nkx2-2P42586 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Gm12260-201ENSMUST00000122447 411 ntBASIC13.65□□□□□ -0.22
Nkx2-2P42586 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nkx2-2P42586 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.65□□□□□ -0.22
Nkx2-2P42586 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nkx2-2P42586 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Nkx2-2P42586 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Gm8749-201ENSMUST00000117737 331 ntBASIC13.64□□□□□ -0.23
Nkx2-2P42586 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-2P42586 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-2P42586 AW822252-206ENSMUST00000208904 237 ntBASIC13.64□□□□□ -0.23
Nkx2-2P42586 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.64□□□□□ -0.23
Nkx2-2P42586 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.64□□□□□ -0.23
Nkx2-2P42586 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.64□□□□□ -0.23
Nkx2-2P42586 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-2P42586 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-2P42586 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-2P42586 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-2P42586 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-2P42586 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms