Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Efs-202ENSMUST00000227037 2540 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.8□□□□□ -0.2
Foxa1P35582 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Mir8117-201ENSMUST00000184773 107 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Gm5264-201ENSMUST00000190584 848 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Gm2272-201ENSMUST00000194903 582 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Gm44492-201ENSMUST00000197012 141 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.8□□□□□ -0.2
Foxa1P35582 Gm45747-201ENSMUST00000212203 999 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Gm10154-201ENSMUST00000084445 354 ntBASIC13.8□□□□□ -0.2
Foxa1P35582 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Foxa1P35582 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxa1P35582 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Foxa1P35582 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.79□□□□□ -0.2
Foxa1P35582 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.79□□□□□ -0.2
Foxa1P35582 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.79□□□□□ -0.2
Foxa1P35582 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.79□□□□□ -0.2
Foxa1P35582 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.79□□□□□ -0.2
Foxa1P35582 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.79□□□□□ -0.2
Foxa1P35582 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.79□□□□□ -0.2
Foxa1P35582 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.79□□□□□ -0.2
Foxa1P35582 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.79□□□□□ -0.2
Foxa1P35582 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.79□□□□□ -0.2
Foxa1P35582 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxa1P35582 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.78□□□□□ -0.2
Foxa1P35582 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Foxa1P35582 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Foxa1P35582 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.78□□□□□ -0.2
Foxa1P35582 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.78□□□□□ -0.2
Foxa1P35582 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
Foxa1P35582 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.78□□□□□ -0.2
Foxa1P35582 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.78□□□□□ -0.2
Foxa1P35582 Gm27301-201ENSMUST00000184012 127 ntBASIC13.78□□□□□ -0.2
Foxa1P35582 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.78□□□□□ -0.2
Foxa1P35582 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.78□□□□□ -0.2
Foxa1P35582 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.78□□□□□ -0.2
Foxa1P35582 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.78□□□□□ -0.2
Foxa1P35582 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Foxa1P35582 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.78□□□□□ -0.2
Foxa1P35582 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Foxa1P35582 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Foxa1P35582 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.78□□□□□ -0.2
Foxa1P35582 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Foxa1P35582 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Foxa1P35582 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.78□□□□□ -0.2
Foxa1P35582 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms