Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.07□□□□□ -0.48
Cdx1P18111 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Gm28659-201ENSMUST00000188013 759 ntBASIC12.07□□□□□ -0.48
Cdx1P18111 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.07□□□□□ -0.48
Cdx1P18111 Gm34391-201ENSMUST00000203706 907 ntBASIC12.07□□□□□ -0.48
Cdx1P18111 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Mzt1-203ENSMUST00000227948 952 ntBASIC12.07□□□□□ -0.48
Cdx1P18111 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdx1P18111 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdx1P18111 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx1P18111 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Cdx1P18111 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdx1P18111 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cdx1P18111 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdx1P18111 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdx1P18111 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdx1P18111 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdx1P18111 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.06□□□□□ -0.48
Cdx1P18111 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdx1P18111 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdx1P18111 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdx1P18111 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.06□□□□□ -0.48
Cdx1P18111 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.06□□□□□ -0.48
Cdx1P18111 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Cdx1P18111 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.06□□□□□ -0.48
Cdx1P18111 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdx1P18111 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdx1P18111 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx1P18111 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.05□□□□□ -0.48
Cdx1P18111 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdx1P18111 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdx1P18111 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdx1P18111 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdx1P18111 Gm13186-201ENSMUST00000118031 316 ntBASIC12.05□□□□□ -0.48
Cdx1P18111 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdx1P18111 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdx1P18111 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdx1P18111 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
Cdx1P18111 Gm27000-201ENSMUST00000182943 842 ntBASIC12.05□□□□□ -0.48
Cdx1P18111 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.05□□□□□ -0.48
Cdx1P18111 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cdx1P18111 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdx1P18111 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdx1P18111 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx1P18111 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms