Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.53□□□□□ -0.72
Hbb-b1P02088 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.53□□□□□ -0.72
Hbb-b1P02088 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.53□□□□□ -0.72
Hbb-b1P02088 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Hbb-b1P02088 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Hbb-b1P02088 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hbb-b1P02088 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hbb-b1P02088 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hbb-b1P02088 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hbb-b1P02088 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.52□□□□□ -0.73
Hbb-b1P02088 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.52□□□□□ -0.73
Hbb-b1P02088 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hbb-b1P02088 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.51□□□□□ -0.73
Hbb-b1P02088 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Gm10033-202ENSMUST00000211874 928 ntBASIC10.51□□□□□ -0.73
Hbb-b1P02088 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hbb-b1P02088 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms