Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
TcraP01849 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.92□□□□□ -0.66
TcraP01849 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC10.92□□□□□ -0.66
TcraP01849 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 Mir6982-201ENSMUST00000184354 68 ntBASIC10.92□□□□□ -0.66
TcraP01849 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.92□□□□□ -0.66
TcraP01849 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
TcraP01849 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
TcraP01849 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.92□□□□□ -0.66
TcraP01849 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
TcraP01849 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
TcraP01849 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
TcraP01849 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
TcraP01849 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.91□□□□□ -0.66
TcraP01849 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TcraP01849 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
TcraP01849 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
TcraP01849 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.91□□□□□ -0.66
TcraP01849 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
TcraP01849 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
TcraP01849 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.91□□□□□ -0.66
TcraP01849 Gm6257-201ENSMUST00000163864 910 ntBASIC10.91□□□□□ -0.66
TcraP01849 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
TcraP01849 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Gm18101-201ENSMUST00000215769 548 ntBASIC10.91□□□□□ -0.66
TcraP01849 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.91□□□□□ -0.66
TcraP01849 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.91□□□□□ -0.66
TcraP01849 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
TcraP01849 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC10.91□□□□□ -0.66
TcraP01849 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
TcraP01849 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.91□□□□□ -0.66
TcraP01849 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
TcraP01849 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
TcraP01849 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TcraP01849 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms