Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc4a4O88343 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.58■□□□□ 0.41
Slc4a4O88343 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc4a4O88343 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc4a4O88343 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Slc4a4O88343 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc4a4O88343 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Slc4a4O88343 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Slc4a4O88343 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Slc4a4O88343 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Slc4a4O88343 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Slc4a4O88343 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc4a4O88343 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc4a4O88343 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Slc4a4O88343 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.58■□□□□ 0.4
Slc4a4O88343 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.58■□□□□ 0.4
Slc4a4O88343 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc4a4O88343 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc4a4O88343 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc4a4O88343 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc4a4O88343 Gm11543-201ENSMUST00000120758 370 ntBASIC17.57■□□□□ 0.4
Slc4a4O88343 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc4a4O88343 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc4a4O88343 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc4a4O88343 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.57■□□□□ 0.4
Slc4a4O88343 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Slc4a4O88343 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc4a4O88343 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.56■□□□□ 0.4
Slc4a4O88343 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.56■□□□□ 0.4
Slc4a4O88343 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.56■□□□□ 0.4
Slc4a4O88343 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.56■□□□□ 0.4
Slc4a4O88343 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Gm5312-201ENSMUST00000203728 547 ntBASIC17.56■□□□□ 0.4
Slc4a4O88343 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.56■□□□□ 0.4
Slc4a4O88343 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slc4a4O88343 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.56■□□□□ 0.4
Slc4a4O88343 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc4a4O88343 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.56■□□□□ 0.4
Slc4a4O88343 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc4a4O88343 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
Slc4a4O88343 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.55■□□□□ 0.4
Slc4a4O88343 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.55■□□□□ 0.4
Slc4a4O88343 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc4a4O88343 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.55■□□□□ 0.4
Slc4a4O88343 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc4a4O88343 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms