Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pdlim1O70400 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.71□□□□□ -0.05
Pdlim1O70400 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.71□□□□□ -0.05
Pdlim1O70400 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.71□□□□□ -0.05
Pdlim1O70400 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.71□□□□□ -0.05
Pdlim1O70400 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.71□□□□□ -0.05
Pdlim1O70400 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.71□□□□□ -0.05
Pdlim1O70400 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.71□□□□□ -0.05
Pdlim1O70400 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.71□□□□□ -0.05
Pdlim1O70400 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdlim1O70400 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Pdlim1O70400 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim1O70400 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim1O70400 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim1O70400 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pdlim1O70400 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.7□□□□□ -0.06
Pdlim1O70400 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.7□□□□□ -0.06
Pdlim1O70400 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.7□□□□□ -0.06
Pdlim1O70400 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.7□□□□□ -0.06
Pdlim1O70400 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.7□□□□□ -0.06
Pdlim1O70400 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.7□□□□□ -0.06
Pdlim1O70400 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.7□□□□□ -0.06
Pdlim1O70400 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.7□□□□□ -0.06
Pdlim1O70400 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pdlim1O70400 Gm25911-201ENSMUST00000157621 56 ntBASIC14.7□□□□□ -0.06
Pdlim1O70400 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.7□□□□□ -0.06
Pdlim1O70400 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pdlim1O70400 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.7□□□□□ -0.06
Pdlim1O70400 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdlim1O70400 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Gm11025-201ENSMUST00000140773 466 ntBASIC14.69□□□□□ -0.06
Pdlim1O70400 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Gm2756-201ENSMUST00000195851 400 ntBASIC14.69□□□□□ -0.06
Pdlim1O70400 Gm2213-201ENSMUST00000197485 688 ntBASIC14.69□□□□□ -0.06
Pdlim1O70400 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pdlim1O70400 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdlim1O70400 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms