Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pja1O55176 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Pja1O55176 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Gm44357-201ENSMUST00000195897 142 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm19658-201ENSMUST00000196231 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44367-201ENSMUST00000196836 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44350-201ENSMUST00000197197 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44390-201ENSMUST00000197533 144 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44313-201ENSMUST00000198018 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44486-201ENSMUST00000198508 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44314-201ENSMUST00000199263 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44394-201ENSMUST00000199558 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44484-201ENSMUST00000199873 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44466-201ENSMUST00000200264 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Gm44359-201ENSMUST00000200671 138 ntBASIC15.75■□□□□ 0.11
Pja1O55176 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.75■□□□□ 0.11
Pja1O55176 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pja1O55176 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pja1O55176 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pja1O55176 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.74■□□□□ 0.11
Pja1O55176 Gm13418-201ENSMUST00000119097 944 ntBASIC15.74■□□□□ 0.11
Pja1O55176 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Pja1O55176 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.74■□□□□ 0.11
Pja1O55176 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.74■□□□□ 0.11
Pja1O55176 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pja1O55176 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.74■□□□□ 0.11
Pja1O55176 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.74■□□□□ 0.11
Pja1O55176 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pja1O55176 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Gm14859-201ENSMUST00000117752 357 ntBASIC15.73■□□□□ 0.11
Pja1O55176 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.73■□□□□ 0.11
Pja1O55176 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.73■□□□□ 0.11
Pja1O55176 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.73■□□□□ 0.11
Pja1O55176 Gm9682-201ENSMUST00000197505 556 ntBASIC15.73■□□□□ 0.11
Pja1O55176 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.73■□□□□ 0.11
Pja1O55176 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Gm18669-201ENSMUST00000216049 778 ntBASIC15.73■□□□□ 0.11
Pja1O55176 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pja1O55176 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pja1O55176 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Pja1O55176 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pja1O55176 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pja1O55176 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms