Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.79■□□□□ 0.28
Stx1aO35526 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.79■□□□□ 0.28
Stx1aO35526 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Gm15372-201ENSMUST00000120729 834 ntBASIC16.79■□□□□ 0.28
Stx1aO35526 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Stx1aO35526 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.79■□□□□ 0.28
Stx1aO35526 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.79■□□□□ 0.28
Stx1aO35526 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.79■□□□□ 0.28
Stx1aO35526 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Stx1aO35526 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.79■□□□□ 0.28
Stx1aO35526 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Stx1aO35526 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Stx1aO35526 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.78■□□□□ 0.28
Stx1aO35526 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.78■□□□□ 0.28
Stx1aO35526 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.78■□□□□ 0.28
Stx1aO35526 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.78■□□□□ 0.28
Stx1aO35526 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Stx1aO35526 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.78■□□□□ 0.28
Stx1aO35526 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Stx1aO35526 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.78■□□□□ 0.28
Stx1aO35526 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.78■□□□□ 0.28
Stx1aO35526 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.78■□□□□ 0.28
Stx1aO35526 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.78■□□□□ 0.28
Stx1aO35526 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Stx1aO35526 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Stx1aO35526 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.77■□□□□ 0.28
Stx1aO35526 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.77■□□□□ 0.28
Stx1aO35526 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Stx1aO35526 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Stx1aO35526 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.77■□□□□ 0.28
Stx1aO35526 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Stx1aO35526 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Stx1aO35526 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stx1aO35526 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stx1aO35526 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stx1aO35526 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stx1aO35526 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stx1aO35526 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stx1aO35526 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Stx1aO35526 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.76■□□□□ 0.27
Stx1aO35526 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Gm27646-201ENSMUST00000183989 110 ntBASIC16.76■□□□□ 0.27
Stx1aO35526 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.76■□□□□ 0.27
Stx1aO35526 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.76■□□□□ 0.27
Stx1aO35526 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Stx1aO35526 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Stx1aO35526 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Stx1aO35526 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.76■□□□□ 0.27
Stx1aO35526 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms