Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Efnb3O35393 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Efnb3O35393 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Efnb3O35393 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.81□□□□□ -0.52
Efnb3O35393 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.81□□□□□ -0.52
Efnb3O35393 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Efnb3O35393 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Efnb3O35393 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.81□□□□□ -0.52
Efnb3O35393 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Efnb3O35393 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.8□□□□□ -0.52
Efnb3O35393 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Efnb3O35393 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Efnb3O35393 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Gm15794-201ENSMUST00000120182 631 ntBASIC11.8□□□□□ -0.52
Efnb3O35393 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.8□□□□□ -0.52
Efnb3O35393 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.8□□□□□ -0.52
Efnb3O35393 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.8□□□□□ -0.52
Efnb3O35393 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Efnb3O35393 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Efnb3O35393 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Efnb3O35393 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.79□□□□□ -0.52
Efnb3O35393 Gm8344-201ENSMUST00000119813 856 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms