Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trove2O08848 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.34■□□□□ 0.05
Trove2O08848 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trove2O08848 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.34■□□□□ 0.05
Trove2O08848 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Gm25406-201ENSMUST00000157599 105 ntBASIC15.34■□□□□ 0.05
Trove2O08848 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.34■□□□□ 0.05
Trove2O08848 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Trove2O08848 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trove2O08848 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trove2O08848 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trove2O08848 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trove2O08848 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trove2O08848 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trove2O08848 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trove2O08848 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trove2O08848 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trove2O08848 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trove2O08848 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trove2O08848 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
Trove2O08848 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trove2O08848 Gm27357-201ENSMUST00000183754 135 ntBASIC15.33■□□□□ 0.04
Trove2O08848 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.33■□□□□ 0.04
Trove2O08848 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.33■□□□□ 0.04
Trove2O08848 Gm7367-201ENSMUST00000057611 492 ntBASIC15.33■□□□□ 0.04
Trove2O08848 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.33■□□□□ 0.04
Trove2O08848 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trove2O08848 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Trove2O08848 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trove2O08848 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.33■□□□□ 0.04
Trove2O08848 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trove2O08848 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trove2O08848 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.32■□□□□ 0.04
Trove2O08848 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.32■□□□□ 0.04
Trove2O08848 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.32■□□□□ 0.04
Trove2O08848 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.32■□□□□ 0.04
Trove2O08848 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.32■□□□□ 0.04
Trove2O08848 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms