Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-3J3QMG8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13d-3J3QMG8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Gm5364-201ENSMUST00000216789 889 ntBASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13d-3J3QMG8 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.08□□□□□ -0.31
Trav13d-3J3QMG8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms