Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NpcdF8VQB8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NpcdF8VQB8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NpcdF8VQB8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NpcdF8VQB8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NpcdF8VQB8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Gm15806-201ENSMUST00000120696 955 ntBASIC17.89■□□□□ 0.45
NpcdF8VQB8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.89■□□□□ 0.45
NpcdF8VQB8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.89■□□□□ 0.45
NpcdF8VQB8 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NpcdF8VQB8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.88■□□□□ 0.45
NpcdF8VQB8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Gm4875-201ENSMUST00000118257 786 ntBASIC17.88■□□□□ 0.45
NpcdF8VQB8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Gm37917-201ENSMUST00000194711 392 ntBASIC17.88■□□□□ 0.45
NpcdF8VQB8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.88■□□□□ 0.45
NpcdF8VQB8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.88■□□□□ 0.45
NpcdF8VQB8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.87■□□□□ 0.45
NpcdF8VQB8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Gm11918-201ENSMUST00000121660 179 ntBASIC17.87■□□□□ 0.45
NpcdF8VQB8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.87■□□□□ 0.45
NpcdF8VQB8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NpcdF8VQB8 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms