Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pcdh1F7BJK1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdh1F7BJK1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Gm15372-201ENSMUST00000120729 834 ntBASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Gm43767-201ENSMUST00000198933 381 ntBASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms