Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gm9385-201ENSMUST00000117563 472 ntBASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gm8000-201ENSMUST00000188378 592 ntBASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpsf4lE9Q2N0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpsf4lE9Q2N0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Gm16026-204ENSMUST00000162652 683 ntBASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Gm10175-201ENSMUST00000086013 645 ntBASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpsf4lE9Q2N0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms