Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Gm43125-201ENSMUST00000201724 730 ntBASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cfap99A0A140LIX9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap99A0A140LIX9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap99A0A140LIX9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.83■□□□□ 0.45
Cfap99A0A140LIX9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap99A0A140LIX9 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.83■□□□□ 0.45
Cfap99A0A140LIX9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap99A0A140LIX9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap99A0A140LIX9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap99A0A140LIX9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cfap99A0A140LIX9 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Rpph1-201ENSMUST00000175096 319 ntBASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.83■□□□□ 0.44
Cfap99A0A140LIX9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.82■□□□□ 0.44
Cfap99A0A140LIX9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cfap99A0A140LIX9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms