Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.41□□□□□ -0.42
Trbv29A0A0G2LB96 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Gm12895-201ENSMUST00000122214 226 ntBASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Gm27646-201ENSMUST00000183989 110 ntBASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv29A0A0G2LB96 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv29A0A0G2LB96 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv29A0A0G2LB96 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv29A0A0G2LB96 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
Trbv29A0A0G2LB96 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv29A0A0G2LB96 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trbv29A0A0G2LB96 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Gm6296-201ENSMUST00000222599 943 ntBASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv29A0A0G2LB96 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv29A0A0G2LB96 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms