Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm10710-201ENSMUST00000047876 3971 ntBASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trav13n-1A0A0G2JEU8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav13n-1A0A0G2JEU8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms