Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-1A0A075B699 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav9d-1A0A075B699 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Trav9d-1A0A075B699 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Carlr-201ENSMUST00000181515 2574 ntBASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Gm18669-201ENSMUST00000216049 778 ntBASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav9d-1A0A075B699 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav9d-1A0A075B699 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Gm11780-201ENSMUST00000136880 516 ntBASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav9d-1A0A075B699 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav9d-1A0A075B699 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-1A0A075B699 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-1A0A075B699 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-1A0A075B699 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-1A0A075B699 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-1A0A075B699 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trav9d-1A0A075B699 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-1A0A075B699 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-1A0A075B699 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms