Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5-4A0A075B652 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Gm11780-201ENSMUST00000136880 516 ntBASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Trav5-4A0A075B652 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Gm43347-201ENSMUST00000200226 580 ntBASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Trav5-4A0A075B652 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Gm9103-201ENSMUST00000119371 405 ntBASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.49□□□□□ -0.41
Trav5-4A0A075B652 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms