Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm13597-201ENSMUST00000121239 375 ntBASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ighv1-55A0A075B5W6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm21009-201ENSMUST00000197169 1669 ntBASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ighv1-55A0A075B5W6 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-55A0A075B5W6 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-55A0A075B5W6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ighv1-55A0A075B5W6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Gm5364-201ENSMUST00000216789 889 ntBASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-55A0A075B5W6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ighv1-55A0A075B5W6 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-55A0A075B5W6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ighv1-55A0A075B5W6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-55A0A075B5W6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-55A0A075B5W6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.76□□□□□ -0.53
Ighv1-55A0A075B5W6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms