Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nr1h3Q9Z0Y9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nr1h3Q9Z0Y9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm16026-204ENSMUST00000162652 683 ntBASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nr1h3Q9Z0Y9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nr1h3Q9Z0Y9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms