Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.14■□□□□ 0.01
Cldn3Q9Z0G9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Gm12008-201ENSMUST00000117791 755 ntBASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Gm6443-201ENSMUST00000203599 874 ntBASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cldn3Q9Z0G9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn3Q9Z0G9 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Gm9727-201ENSMUST00000161387 555 ntBASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn3Q9Z0G9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms