Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Gm9719-201ENSMUST00000162765 543 ntBASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 AA543401-201ENSMUST00000164248 1269 ntBASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Gm27618-201ENSMUST00000183671 60 ntBASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Gm18049-201ENSMUST00000208909 581 ntBASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Scn8aQ9WTU3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scn8aQ9WTU3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.96□□□□□ -0.02
Scn8aQ9WTU3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scn8aQ9WTU3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Scn8aQ9WTU3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Gm38225-201ENSMUST00000194001 393 ntBASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Scn8aQ9WTU3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm15920-201ENSMUST00000118998 402 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm24158-201ENSMUST00000175263 71 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm12428-201ENSMUST00000119844 727 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm9824-201ENSMUST00000178707 561 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Carlr-201ENSMUST00000181515 2574 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Efs-202ENSMUST00000227037 2540 ntBASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Scn8aQ9WTU3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn8aQ9WTU3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms