Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn5Q9JL35 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Gm15039-201ENSMUST00000118914 875 ntBASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.82■□□□□ 0.28
Hmgn5Q9JL35 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Gm9013-201ENSMUST00000132939 882 ntBASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.81■□□□□ 0.28
Hmgn5Q9JL35 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn5Q9JL35 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms