Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
U2af1Q9D883 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
U2af1Q9D883 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.63■□□□□ 0.73
U2af1Q9D883 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
U2af1Q9D883 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.63■□□□□ 0.73
U2af1Q9D883 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.62■□□□□ 0.73
U2af1Q9D883 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.62■□□□□ 0.73
U2af1Q9D883 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
U2af1Q9D883 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
U2af1Q9D883 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.62■□□□□ 0.73
U2af1Q9D883 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
U2af1Q9D883 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
U2af1Q9D883 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
U2af1Q9D883 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.62■□□□□ 0.73
U2af1Q9D883 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
U2af1Q9D883 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.61■□□□□ 0.73
U2af1Q9D883 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.61■□□□□ 0.73
U2af1Q9D883 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.61■□□□□ 0.73
U2af1Q9D883 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
U2af1Q9D883 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.61■□□□□ 0.73
U2af1Q9D883 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Mir6990-201ENSMUST00000183724 91 ntBASIC19.61■□□□□ 0.73
U2af1Q9D883 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
U2af1Q9D883 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
U2af1Q9D883 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
U2af1Q9D883 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
U2af1Q9D883 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
U2af1Q9D883 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
U2af1Q9D883 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.6■□□□□ 0.73
U2af1Q9D883 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
U2af1Q9D883 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms