Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.49■□□□□ 0.23
Q9CYI0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.49■□□□□ 0.23
Q9CYI0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Q9CYI0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.49■□□□□ 0.23
Q9CYI0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 BC037039-201ENSMUST00000192003 2205 ntBASIC16.49■□□□□ 0.23
Q9CYI0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Q9CYI0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.48■□□□□ 0.23
Q9CYI0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.48■□□□□ 0.23
Q9CYI0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.48■□□□□ 0.23
Q9CYI0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.48■□□□□ 0.23
Q9CYI0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.48■□□□□ 0.23
Q9CYI0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.48■□□□□ 0.23
Q9CYI0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.48■□□□□ 0.23
Q9CYI0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Q9CYI0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Q9CYI0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Q9CYI0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Q9CYI0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.47■□□□□ 0.23
Q9CYI0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.47■□□□□ 0.23
Q9CYI0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Gm43125-201ENSMUST00000201724 730 ntBASIC16.47■□□□□ 0.23
Q9CYI0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.47■□□□□ 0.23
Q9CYI0 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.47■□□□□ 0.23
Q9CYI0 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.47■□□□□ 0.23
Q9CYI0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Q9CYI0 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.47■□□□□ 0.23
Q9CYI0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Q9CYI0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Q9CYI0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.47■□□□□ 0.23
Q9CYI0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.47■□□□□ 0.23
Q9CYI0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Q9CYI0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Q9CYI0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.46■□□□□ 0.23
Q9CYI0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Q9CYI0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.46■□□□□ 0.23
Q9CYI0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.46■□□□□ 0.23
Q9CYI0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.46■□□□□ 0.23
Q9CYI0 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.46■□□□□ 0.23
Q9CYI0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Q9CYI0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.46■□□□□ 0.23
Q9CYI0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms