Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Gm28659-201ENSMUST00000188013 759 ntBASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Gm5864-201ENSMUST00000202263 970 ntBASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim11Q99PQ2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Gm13884-201ENSMUST00000118103 829 ntBASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim11Q99PQ2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim11Q99PQ2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim11Q99PQ2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim11Q99PQ2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gm4899-201ENSMUST00000178708 719 ntBASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gm18246-201ENSMUST00000221023 728 ntBASIC17.01■□□□□ 0.31
Trim11Q99PQ2 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim11Q99PQ2 Gm45133-201ENSMUST00000207548 2773 ntBASIC17■□□□□ 0.31
Trim11Q99PQ2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim11Q99PQ2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Gm6184-201ENSMUST00000120403 1261 ntBASIC17■□□□□ 0.31
Trim11Q99PQ2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim11Q99PQ2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Trim11Q99PQ2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17■□□□□ 0.31
Trim11Q99PQ2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim11Q99PQ2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim11Q99PQ2 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17■□□□□ 0.31
Trim11Q99PQ2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim11Q99PQ2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms