Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.2■□□□□ 0.66
Rtn4Q99P72 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Gm17790-201ENSMUST00000191545 1228 ntBASIC19.2■□□□□ 0.66
Rtn4Q99P72 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4Q99P72 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rtn4Q99P72 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.19■□□□□ 0.66
Rtn4Q99P72 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Gm5133-201ENSMUST00000118940 1255 ntBASIC19.19■□□□□ 0.66
Rtn4Q99P72 Gm25026-201ENSMUST00000175017 188 ntBASIC19.19■□□□□ 0.66
Rtn4Q99P72 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Gm44251-201ENSMUST00000204963 442 ntBASIC19.19■□□□□ 0.66
Rtn4Q99P72 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rtn4Q99P72 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rtn4Q99P72 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Gm37736-201ENSMUST00000193564 2802 ntBASIC19.18■□□□□ 0.66
Rtn4Q99P72 Gm45546-201ENSMUST00000211053 2394 ntBASIC19.18■□□□□ 0.66
Rtn4Q99P72 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Mir8117-201ENSMUST00000184773 107 ntBASIC19.18■□□□□ 0.66
Rtn4Q99P72 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4Q99P72 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.18■□□□□ 0.66
Rtn4Q99P72 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 AC159649.2-201ENSMUST00000222984 3223 ntBASIC19.17■□□□□ 0.66
Rtn4Q99P72 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Gm37912-201ENSMUST00000191895 3076 ntBASIC19.17■□□□□ 0.66
Rtn4Q99P72 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
Rtn4Q99P72 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.17■□□□□ 0.66
Rtn4Q99P72 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Gm34272-201ENSMUST00000208886 253 ntBASIC19.17■□□□□ 0.66
Rtn4Q99P72 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.17■□□□□ 0.66
Rtn4Q99P72 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4Q99P72 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4Q99P72 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms