Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Gm15483-201ENSMUST00000120338 456 ntBASIC14.93□□□□□ -0.02
Cstf1Q99LC2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Gm25857-201ENSMUST00000082788 129 ntBASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cstf1Q99LC2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Gm13015-201ENSMUST00000118674 204 ntBASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Gm28631-201ENSMUST00000190740 334 ntBASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cstf1Q99LC2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cstf1Q99LC2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cstf1Q99LC2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms