Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vmp1Q99KU0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vmp1Q99KU0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Gm15358-201ENSMUST00000119249 520 ntBASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Gm12350-201ENSMUST00000121208 462 ntBASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vmp1Q99KU0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.41□□□□□ -0.1
Vmp1Q99KU0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.41□□□□□ -0.1
Vmp1Q99KU0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms