Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Gm15165-201ENSMUST00000118140 502 ntBASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Gm29518-201ENSMUST00000190858 372 ntBASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Thumpd1Q99J36 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Thumpd1Q99J36 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Thumpd1Q99J36 Carlr-201ENSMUST00000181515 2574 ntBASIC13.33□□□□□ -0.27
Thumpd1Q99J36 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Thumpd1Q99J36 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Thumpd1Q99J36 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.33□□□□□ -0.27
Thumpd1Q99J36 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Thumpd1Q99J36 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Gm4459-201ENSMUST00000118750 468 ntBASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Gm43767-201ENSMUST00000198933 381 ntBASIC13.33□□□□□ -0.28
Thumpd1Q99J36 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Gm8655-201ENSMUST00000221159 852 ntBASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thumpd1Q99J36 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Thumpd1Q99J36 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms