Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha2Q91Y17 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Gm23935-201ENSMUST00000102303 57 ntBASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Gm24270-201ENSMUST00000102326 57 ntBASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Gm13365-201ENSMUST00000121188 973 ntBASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Gm24245-201ENSMUST00000157318 57 ntBASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha2Q91Y17 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Mir1895-201ENSMUST00000122615 79 ntBASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Chchd1-203ENSMUST00000224633 557 ntBASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha2Q91Y17 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Gm43575-201ENSMUST00000196420 516 ntBASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Gm18057-201ENSMUST00000208220 503 ntBASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdha2Q91Y17 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdha2Q91Y17 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms