Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb1Q91Y08 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb1Q91Y08 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb1Q91Y08 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhb1Q91Y08 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Gm13597-201ENSMUST00000121239 375 ntBASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Gm2272-201ENSMUST00000194903 582 ntBASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb1Q91Y08 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb1Q91Y08 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms