Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhgc5Q91XW9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhgc5Q91XW9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhgc5Q91XW9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhgc5Q91XW9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgc5Q91XW9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhgc5Q91XW9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhgc5Q91XW9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Gm5779-201ENSMUST00000218467 910 ntBASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhgc5Q91XW9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms