Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim68Q8K243 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim68Q8K243 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim68Q8K243 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim68Q8K243 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim68Q8K243 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.23■□□□□ 0.19
Trim68Q8K243 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim68Q8K243 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim68Q8K243 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.22■□□□□ 0.19
Trim68Q8K243 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim68Q8K243 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Gm27430-201ENSMUST00000184585 107 ntBASIC16.22■□□□□ 0.19
Trim68Q8K243 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Gm44333-201ENSMUST00000197168 107 ntBASIC16.22■□□□□ 0.19
Trim68Q8K243 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim68Q8K243 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim68Q8K243 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.21■□□□□ 0.19
Trim68Q8K243 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
Trim68Q8K243 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.21■□□□□ 0.19
Trim68Q8K243 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Trim68Q8K243 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.21■□□□□ 0.19
Trim68Q8K243 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.21■□□□□ 0.19
Trim68Q8K243 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.21■□□□□ 0.19
Trim68Q8K243 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim68Q8K243 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim68Q8K243 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim68Q8K243 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trim68Q8K243 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim68Q8K243 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim68Q8K243 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim68Q8K243 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms