Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco1Q8CEZ1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Celf4-206ENSMUST00000224553 1729 ntBASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smco1Q8CEZ1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smco1Q8CEZ1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco1Q8CEZ1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smco1Q8CEZ1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.62□□□□□ -0.23
Smco1Q8CEZ1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Smco1Q8CEZ1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco1Q8CEZ1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco1Q8CEZ1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.62□□□□□ -0.23
Smco1Q8CEZ1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smco1Q8CEZ1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smco1Q8CEZ1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms