Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Prpf31Q8CCF0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Gm43474-201ENSMUST00000196415 774 ntBASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Prpf31Q8CCF0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Gm15483-201ENSMUST00000120338 456 ntBASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Gm5312-201ENSMUST00000203728 547 ntBASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Prpf31Q8CCF0 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Gm43125-201ENSMUST00000201724 730 ntBASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.3■□□□□ 0.2
Prpf31Q8CCF0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms