Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Aph1bQ8C7N7 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Aph1bQ8C7N7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Aph1bQ8C7N7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Gm7222-201ENSMUST00000117512 906 ntBASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
Aph1bQ8C7N7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Gm11764-201ENSMUST00000120221 623 ntBASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Gm21362-201ENSMUST00000194272 928 ntBASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Aph1bQ8C7N7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Aph1bQ8C7N7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Aph1bQ8C7N7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Aph1bQ8C7N7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms