Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Gm10231-201ENSMUST00000181584 441 ntBASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Gm10175-202ENSMUST00000208752 441 ntBASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm11Q8BUV6 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Rprl3-201ENSMUST00000157400 290 ntBASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Gm25745-201ENSMUST00000174945 133 ntBASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Gm45878-201ENSMUST00000211839 241 ntBASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm11Q8BUV6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Gm12008-201ENSMUST00000117791 755 ntBASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Gm8344-201ENSMUST00000119813 856 ntBASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Gm8318-201ENSMUST00000182954 872 ntBASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm11Q8BUV6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms