Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Slc5a7Q8BGY9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Gm19164-201ENSMUST00000210667 640 ntBASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc5a7Q8BGY9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Gm45058-201ENSMUST00000205810 766 ntBASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc5a7Q8BGY9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Slc5a7Q8BGY9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.08□□□□□ -0.31
Slc5a7Q8BGY9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Slc5a7Q8BGY9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Slc5a7Q8BGY9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Slc5a7Q8BGY9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Matn2-206ENSMUST00000228570 2798 ntBASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.08□□□□□ -0.32
Slc5a7Q8BGY9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms