Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Olfr129-201ENSMUST00000122318 993 ntBASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Gm27357-201ENSMUST00000183754 135 ntBASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smndc1Q8BGT7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Gm29707-201ENSMUST00000196325 491 ntBASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Gm44450-201ENSMUST00000199528 114 ntBASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Smndc1Q8BGT7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.53□□□□□ -0.08
Smndc1Q8BGT7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smndc1Q8BGT7 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smndc1Q8BGT7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Smndc1Q8BGT7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smndc1Q8BGT7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms