Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Zc3hc1Q80YV2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Zc3hc1Q80YV2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Gm15358-201ENSMUST00000119249 520 ntBASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Zc3hc1Q80YV2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Gm27742-201ENSMUST00000184667 60 ntBASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Gm7506-201ENSMUST00000207758 815 ntBASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Zc3hc1Q80YV2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms