Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.07□□□□□ -0.8
Csmd3Q80T79 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.07□□□□□ -0.8
Csmd3Q80T79 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm27731-201ENSMUST00000185192 107 ntBASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.07□□□□□ -0.8
Csmd3Q80T79 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.07□□□□□ -0.8
Csmd3Q80T79 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Csmd3Q80T79 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.06□□□□□ -0.8
Csmd3Q80T79 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Gm5763-201ENSMUST00000155951 1530 ntBASIC10.06□□□□□ -0.8
Csmd3Q80T79 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Gm6091-201ENSMUST00000098307 165 ntBASIC10.06□□□□□ -0.8
Csmd3Q80T79 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.06□□□□□ -0.8
Csmd3Q80T79 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.06□□□□□ -0.8
Csmd3Q80T79 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Csmd3Q80T79 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Gm3786-201ENSMUST00000202659 378 ntBASIC10.05□□□□□ -0.8
Csmd3Q80T79 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.05□□□□□ -0.8
Csmd3Q80T79 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Gm5187-201ENSMUST00000117317 991 ntBASIC10.05□□□□□ -0.8
Csmd3Q80T79 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Mir8109-201ENSMUST00000184375 117 ntBASIC10.05□□□□□ -0.8
Csmd3Q80T79 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.05□□□□□ -0.8
Csmd3Q80T79 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.05□□□□□ -0.8
Csmd3Q80T79 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Csmd3Q80T79 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Csmd3Q80T79 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms