Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Gm9013-201ENSMUST00000132939 882 ntBASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rfx4Q7TNK1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Carlr-201ENSMUST00000181515 2574 ntBASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Gm15565-201ENSMUST00000118890 427 ntBASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Gm6623-201ENSMUST00000173570 544 ntBASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rfx4Q7TNK1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Gm6433-201ENSMUST00000118634 875 ntBASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Gm10252-201ENSMUST00000209541 832 ntBASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rfx4Q7TNK1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rfx4Q7TNK1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms