Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Gm11452-201ENSMUST00000122376 690 ntBASIC16.3■□□□□ 0.2
Snd1Q78PY7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Gm18733-201ENSMUST00000173950 856 ntBASIC16.3■□□□□ 0.2
Snd1Q78PY7 Gm25745-201ENSMUST00000174945 133 ntBASIC16.3■□□□□ 0.2
Snd1Q78PY7 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.3■□□□□ 0.2
Snd1Q78PY7 Gm27867-201ENSMUST00000184778 125 ntBASIC16.3■□□□□ 0.2
Snd1Q78PY7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Snd1Q78PY7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.29■□□□□ 0.2
Snd1Q78PY7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Gm12644-201ENSMUST00000119935 606 ntBASIC16.29■□□□□ 0.2
Snd1Q78PY7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Snd1Q78PY7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.28■□□□□ 0.2
Snd1Q78PY7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.28■□□□□ 0.2
Snd1Q78PY7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.28■□□□□ 0.2
Snd1Q78PY7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms