Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Dhx40Q6PE54 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Gm7153-201ENSMUST00000117092 455 ntBASIC16.61■□□□□ 0.25
Dhx40Q6PE54 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Dhx40Q6PE54 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Gm6296-201ENSMUST00000222599 943 ntBASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.6■□□□□ 0.25
Dhx40Q6PE54 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Dhx40Q6PE54 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms