Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sdc3Q64519 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sdc3Q64519 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sdc3Q64519 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.38□□□□□ -0.11
Sdc3Q64519 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.38□□□□□ -0.11
Sdc3Q64519 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
Sdc3Q64519 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.38□□□□□ -0.11
Sdc3Q64519 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.38□□□□□ -0.11
Sdc3Q64519 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sdc3Q64519 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.38□□□□□ -0.11
Sdc3Q64519 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Sdc3Q64519 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.37□□□□□ -0.11
Sdc3Q64519 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sdc3Q64519 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.37□□□□□ -0.11
Sdc3Q64519 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.37□□□□□ -0.11
Sdc3Q64519 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.37□□□□□ -0.11
Sdc3Q64519 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.37□□□□□ -0.11
Sdc3Q64519 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.37□□□□□ -0.11
Sdc3Q64519 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sdc3Q64519 Gm2756-201ENSMUST00000195851 400 ntBASIC14.37□□□□□ -0.11
Sdc3Q64519 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Sdc3Q64519 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.37□□□□□ -0.11
Sdc3Q64519 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sdc3Q64519 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sdc3Q64519 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sdc3Q64519 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sdc3Q64519 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sdc3Q64519 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.36□□□□□ -0.11
Sdc3Q64519 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.36□□□□□ -0.11
Sdc3Q64519 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sdc3Q64519 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.36□□□□□ -0.11
Sdc3Q64519 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.36□□□□□ -0.11
Sdc3Q64519 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.36□□□□□ -0.11
Sdc3Q64519 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Sdc3Q64519 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.36□□□□□ -0.11
Sdc3Q64519 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.36□□□□□ -0.11
Sdc3Q64519 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sdc3Q64519 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Sdc3Q64519 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.35□□□□□ -0.11
Sdc3Q64519 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sdc3Q64519 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms