Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.31■□□□□ 0.2
Cln3Q61124 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cln3Q61124 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.31■□□□□ 0.2
Cln3Q61124 Gm19891-201ENSMUST00000189771 303 ntBASIC16.31■□□□□ 0.2
Cln3Q61124 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Cln3Q61124 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.31■□□□□ 0.2
Cln3Q61124 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cln3Q61124 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Cln3Q61124 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cln3Q61124 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.31■□□□□ 0.2
Cln3Q61124 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cln3Q61124 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cln3Q61124 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.31■□□□□ 0.2
Cln3Q61124 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cln3Q61124 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
Cln3Q61124 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cln3Q61124 Gm6222-201ENSMUST00000120787 396 ntBASIC16.3■□□□□ 0.2
Cln3Q61124 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.3■□□□□ 0.2
Cln3Q61124 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.3■□□□□ 0.2
Cln3Q61124 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC16.3■□□□□ 0.2
Cln3Q61124 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.3■□□□□ 0.2
Cln3Q61124 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.3■□□□□ 0.2
Cln3Q61124 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cln3Q61124 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.29■□□□□ 0.2
Cln3Q61124 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cln3Q61124 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.29■□□□□ 0.2
Cln3Q61124 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cln3Q61124 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cln3Q61124 Asic1-205ENSMUST00000228185 1818 ntBASIC16.29■□□□□ 0.2
Cln3Q61124 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.28■□□□□ 0.2
Cln3Q61124 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.28■□□□□ 0.2
Cln3Q61124 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cln3Q61124 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.28■□□□□ 0.2
Cln3Q61124 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Cln3Q61124 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.28■□□□□ 0.2
Cln3Q61124 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cln3Q61124 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cln3Q61124 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cln3Q61124 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms